29 April 2010

Celebrate diversity: Parthenogenesis in white tipped bamboo shark

ResearchBlogging.orgA few years ago, a bonnethead shark made the news because one had given birth. Giving birth is not unusual for sharks... except that the female in question had grown up in isolation. Good evidence for parthenogenesis.

Shortly after that, another shark species (blacktip) was autopsied and found to have an embryo that was genetically identical to the mother. Clearly, parthenogenesis in sharks was not happenstance. But in both cases, the parthenogenetic offspring didn’t live long. Are the offspring able to make it to adulthood?

A new paper examined this in white spotted bamboo shark (Chiloscyllium plagiosum). It came to an aquarium as a juvenile, and kept laying eggs that were discarded as nonviable... until word got out about the bonnethead shark, and one of the savvy keepers decided to start keeping the cases. Out of seven eggs, four hatched. One died young, one “committed suicide” (jumped out of the tank), and the other two grew up to be find, upstanding bamboo shark ladies.

DNA testing confirmed that the offspring had the same genetic make-up as the mother. Definitely parthenogenesis going on here.

Feldheim and colleagues also note that the bamboo sharks they tested in aquaria seemed to be quite inbred. They seem to be hinting that this inbreeding may be facilitating parthenogenetic reproduction. With so few individuals to work with at this point, it’s too early to tell.

What is particularly cool and exciting about this finding is not just the evidence that these shark clones are perfectly viable and can live to adulthood, but this particular species is in a completely different order of sharks compared to the previous two species. That means the capability is either very widespread, or has evolved multiple times. Either way, the ecological and evolutionary importance of parthenogenesis in this group is larger than expected.

Reference

Feldheim K, Chapman D, Sweet D, Fitzpatrick S, Prodohl P, Shivji M, Snowden B. 2010. Shark virgin birth produces multiple, viable offspring. Journal of Heredity 101(3): 374-377. doi: 10.1093/jhered/esp129

Adult white-spotted bamboo shark picture by Danielguip on Flickr; eggs picture by Questionhead on Flickr. Both are used under a Creative Commons license.

22 April 2010

Wow. There really is an app for that.

For the astacologist on the go...


Spotted on FontFeed.

13 April 2010

A new way to become all female

“Tychoparthenogenesis.”

This is a word that a new paper in Proceedings of the Royal Society of London B had added to my vocabulary. It refers to how an unfertilized egg in a normally sexual species can sometimes develop into a female and hatch. If that turns out to be possible, you have a small foothold that natural selection can work on, providing a way that a species can gradually become asexual.

Hybridization seems to be the most common pathway to parthenogenesis, though.

Picture of Tycho crater by Michael Karrer on Flickr, and used under a Creative Commons license.

01 April 2010

Madagascar takes small step back to conservation

Science magazine is reporting (paywall) that the government of Madagascar is reversing a decision to log rosewood. Madagascar’s natural ecosystems are still very much under pressure, though, and they are a dangerous places:

(S)tudying Madagascar's forests has become dangerous. Fisher says visitors are sometimes threatened by organized criminal loggers. During his recent survey of the northeastern forests, he says, “we had to monitor our food for possible poisoning.” He found only a single unpaid ranger “confronting the lemur trappers and loggers. ... His life is continually threatened.”

Tracking the spread of Marmorkrebs in Madagascar is probably going to be nigh impossible for a while.

23 March 2010

Excavation



(I’m pretty sure this is faster than normal.)

16 March 2010

Please don’t call her “Procambarus marmorkrebs”

I routinely see people referring to “Procambarus marmorkrebs” on the web. For the record, there is no such species name.

Procambarus sp.” is okay. The “sp.” indicates an undetermined species in a genus. “Marmorkrebs” is okay as a common name; indeed, I recommend it over marbled crayfish. But “P. marmorkrebs” can’t be a species name, because “Marmorkrebs” is a German word, not Latin or Greek.

It’s a grating error to put the two of them together.

09 March 2010

Great moments in crayfish research: Command and control

The big question for neuroscience is how nervous systems generate behaviour and cognition. In general, we think there’s a hierachical command scheme, as the quick and dirty sketch below shows.


It’s been hard to move from general principles and “black boxes” to real neurons. A good chunk of effort in neuroethology has gone into understanding the sensory capabilities of different animals, and cracking how pattern generators could generate the detailed plan for movements, especially rhythmic behaviours. Research on command neurons, though, has focused on neurons that generate simple behaviours that are strongly stimulus driven, like escape responses. But many behaviours are far more... subtle. Behaviour is often spontaneous, and no clear stimulus is visible to an external observer.

Ideally, to understand the linkages I showed above, you’d want to record from all those different layers simultaneously: you’d want to know what the neurons are doing while you are simultaneously recording behaviour. Command neurons are involved tend to be located deep in the animal, so it is hard to locate and record from them in a way where there is enough animal left to behave. Jim Larimer and colleagues published a series of nice articles back in the 1970s showing that such neurons existed in crayfish, and reliably stimulated certain behaviours, like walking (Bowerman and Larimer 1974a, b).

Invertebrate locomotion has been very influential in influencing our understanding of motor control. During grad school, I was heavily reading papers on crustacean walking. That line of research seems to have slowed a bit since then, but this paper by Kagaya and Takahata is an amazing update to the field. I am, quite frankly, in awe of its technical prowess.

Procambarus clarkiiKagaya and Takahata must have spent a very long time troubleshooting these experiments. Using Louisiana red swamp crayfish, they were able to record from neurons heading from the brain to the thorax (where the legs are attached and controlled) and stimulate them, record key leg muscles involved in walking, and record the final behaviour, the trajectory and speed of the crayfish walking.

The authors recorded from several kinds of neurons running from the brain toward the thorax that had interesting influences on walking. Perhaps the most interesting were the ones that started firing before any behaviour started, which they called the “readiness discharge.” They were also able to stimulate these neurons electrically, and show reasonably well that their stimulation would initiate walking.

Intuitively, you might expect that you would only need one neuron to initiate a particular behaviour, and it wouldn’t matter all that much whether the source feeding into that initiation was external or internal. But that's the fascinating thing is that the “readiness discharge” neurons were not active when crayfish were “encouraged” to walk by touching them; reflexive walking was correlated with other neurons descending from the brain.

The “readiness discharge” neurons seemed to be involved only in spontaneous walking, and not reflexive walking. And isn’t spontaneous behaviour the usual place where “free will” gets invoked to explain what happens in complex animals?

They also found a variety of other interesting neurons. They found neurons that seemed to stop walking. They found neurons that appeared to be involved in maintaining walking, including some neurons that would fire only when walking in a particular direction.

At this point, all we know about these cells is the firing patterns of their action potentials. And it’s very difficult to know how many neurons might be missed, or if perhaps these neurons are overcategorized. We don’t know anything about their anatomy in the brain or in the rest of the nervous system, how they might be modulated, or anything. But now that we know they’re there... maybe people will start to figure out some ways to track these down.

This is the kind of paper that you don’t see enough of: classic, hard-core neuroethology. But it’s tough going to read it. Having detailed physiological recordings at multiple levels means that the experiments defy easy summary. Consequently, this paper may be like jazz music: there may be more people who admire the technical virtuosity than there are people who “get it.”

References

Bowerman RF, Larimer JL. 1974a. Command fibres in the circumoesophageal connectives of crayfish I. Tonic Fibres. The Journal of Experimental Biology 60:95-117. http://jeb.biologists.org/cgi/content/abstract/60/1/95

Bowerman RF, Larimer JL. 1974b. Command fibres in the circumoesophageal connectives of crayfish II. Phasic fibres. The Journal of Experimental Biology 60:119-134. http://jeb.biologists.org/cgi/content/abstract/60/1/119

Kagaya K, Takahata M. 2010. Readiness discharge for spontaneous initiation of walking in crayfish Journal of Neuroscience 30(4): 1348-1362. DOI: 10.1523/jneurosci.4885-09.2010

[Crossposted at NeuroDojo]