31 October 2008

Pic of the moment: 31 October 2008

Astacopsis gouldi
Boo!

A monster crayfish for Hallowe'en!

Although I lived in Australia for a couple of years, one of my few regrets is that I never got to Tasmania, where this beast lives. Astacopsis gouldi is the biggest crayfish -- indeed, the biggest freshwater invertebrate -- in the world.

From old news story here.

28 October 2008

The devil herself

She-Devil movie posterThread title is taken from a caption underneath a picture of Marmorkrebs in an excellent post over at the Amphidrome blog about the recent discovery of Marmorkrebs in Madagascar. In particular, it notes of the native Madagascar crayfish species, which belong to the genus Astacoides:

(H)abitat loss and overharvesting have hit (Astacoides) crosnieri and A. petiti hard enough to earn them endangered status on the IUCN Red List.

Many good references there, too.

21 October 2008

The obstacles to asexuality

BioEssaysOne of the few things about the origin of Marmorkrebs that appears indisputable is that it evolved from a sexually reproducing species. An new review paper in BioEssays examines some of the obstacles that an organism has to overcome to switch from sexual to asexual reproduction. As such, it surely lays our a lot of the conceptual groundwork for research on the origin of Marmorkrebs.

Engelstädter J. 2008. Constraints on the evolution of asexual reproduction. BioEssays 30(11-12): 1138-1150. http://dx.doi.org/10.1002/bies.20833

17 October 2008

Vogt, 2008c

Vogt G. 2008. How to minimize formation and growth of tumours: Potential benefits of decapod crustaceans for cancer research. International Journal of Cancer 123: 2727–2734.
http://dx.doi.org/10.1002/ijc.23947



Abstract

Tumours have only rarely been observed in the decapod crustaceans, a large animal group of more than 10,000 species that includes the commercially important and well investigated shrimp, lobsters, crayfish and crabs. Analysis of the literature and information from cancer and diseases data bases revealed a total of 15 incidences, some of them being questionable. Even in the long-lived species, which can reach life spans of almost 100 years, neoplasias are virtually unknown. The data published so far suggest that the strikingly different frequencies of carcinogenesis between decapods and other well investigated animal groups like mammals, fish, insects and molluscs is based on differences of the metabolic pathways for carcinogens, the immune systems, and the regulation of stem cells. Therefore, representatives of the Decapoda may serve as useful models to study how organisms can successfully prevent or control spontaneously and environmentally induced cell proliferation. A particularly promising candidate for in-depth investigation of these topics is the marbled crayfish, a rather new clonal lineage that is presently being introduced as a laboratory model in development and epigenetics.

Keywords: neoplasia • Decapoda • Crustacea • stem cells • detoxification of carcinogens • age-related cancer • immune system • epigenetics • marbled crayfish

14 October 2008

Artistic merits

An artist with the handle Marmorkrebs has a piece on the deviantART website.

10 October 2008

From small acorns

I haven't been blogging a lot, because I'm teaching some very time consuming classes this semester (one in particular is wailing on me). So just a quick one for now...

I wanted to pass on a tip from Frederike Alwes (coauthor of this paper), who informed me that Marmorkrebs like oak leaves in their tanks, both as food and for making the water perhaps a bit more acidic. We're trying it out in our lab now.

30 September 2008

Wiring the -ome

NeuronBank is a project I have been offering moral support to, mainly in the form of links here and there around the Marmorkrebs websites I run. The goal of NeuronBank is to compile the "neurome" for organisms, mainly invertebrates.

Most people are familiar with the concept of a genome: the sum total of all the genes in an organism. Since the success of the Human Genome Project, other "-ome" projects have been slowly creeping into scientific awareness. Arguably proteomics is one of the most common new -omes in the scientific news. Neuromes -- a description of all neurons in an animal -- are not in that league yet, but that may start to change.

A forthcoming new review by Lichtman and Sanes in Current Opinion in Neurobiology goes one step further, discussing not only neuromes, but connectomes: a description of not only all the neurons in a nervous system, but their anatomical and physiological connections, too.

If that sounds difficult, it is, but it's already been done in one animal: the little nematode worm C. elegans. The C. elegans project is discussed in some detail -- which it has to be, seeing how it's the only animal in the connections between all 302 neurons in the wild-type animal has been described.

While there is no complete neurome or connectome for a crustacean, there are neuromes and connectomes for parts of crustacean nervous systems. The stomatogastric ganglion in several species has about 30 neurons, and all the neurons and all the connections in the stomatogastric ganglion are known for some crabs and lobsters, thanks largely to work in Allen Selverston's lab. This has led to a massive amount of research on the stomatogastric ganglion. Literally entire books have been written on the subject (Harris-Warrick, 1992; a PDF of the first chapter is available here).

The crustacean cardiac ganglion, which usually has 9 neurons, may also have a complete circuit worked out for it, though I have been unable to confirm this in writing this post. In any case, it is well characterized (Cook, 2002).

But are other parts of the crustacean nervous system amenable to compiling a even a partial neurome, never mind a connectome? I think so, and suggest crayfish abdominal ganglia are ripe for creating a neurome.

Crayfish abdominal ganglion by RetziusThe tail of a crayfish contains six clusters of nerve cells (a.k.a. ganglia). The first five from the front are very similar, and only the very last one, the terminal abdominal ganglion, is substantially different than the others. The abdominal ganglia of crayfish are widely used for electrophysiology, because the dissection is very simple. Wine (1984) estimated that there are about 650 neurons in each of the first five abdominal ganglia.

650 is not that big a number of neurons. And a reasonable number of them are already described. Given a few dedicated labs, creating a neurome for these ganglia seems at least feasible.

In one of my earliest posts on this blog: Every major model organism has earned that rank on the back of a massive descriptive project. I've already said there should be a crayfish genome project; a crayfish neurome project should be in the works, too.

References

Cooke IM. 2002. Reliable, responsive pacemaking and pattern generation with minimal cell numbers: the crustacean cardiac ganglion. The Biological Bulletin 202: 108-136. http://www.biolbull.org/cgi/content/full/202/2/108

Harris-Warrick RM, Marder E, Selverston AI, Moulins M (eds.). 1992. Dynamic Biological Networks: The Stomatogastric Nervous System. Cambridge: MIT Press.

Lichtman JW & Sanes JR. 2008. Ome sweet ome: what can the genome tell us about the connectome? Current Opinion in Neurobiology: In press. http://dx.doi.org/10.1016/j.conb.2008.08.010

Wine JJ. 1984. The structural basis of an innate behavioural pattern. The Journal of Experimental Biology 112: 283-319. http://jeb.biologists.org/cgi/content/abstract/112/1/283