16 December 2008

Season's greetings

If your Christmas cards are not sufficiently crustacean inspired, click here for a PDF of a Christmas card you can print out and mail to your friends or attach to their presents.

You may also want to check out last year's Christmas greeting if you're still looking for more festive cheer.

09 December 2008

Fabritius-Vilpoux and colleagues, 2008

Invertebrate NeuroscienceFabritius-Vilpoux K, Bisch-Knaden S & Harzsch S. Engrailed-like immunoreactivity in the embryonic ventral nerve cord of the Marbled Crayfish (Marmorkrebs). Invertebrate Neuroscience 8(4): 177-197.
http://dx.doi.org/10.1007/s10158-008-0081-7

Abstract

The homeobox transcription factor Engrailed is involved in controlling segmentation during arthropod germ band formation but also in establishing individual neuronal identities during later embryogenesis. In Crustacea, most studies analysing the expression of Engrailed so far have focussed on its function as segment polarity gene. In continuation to these previous studies, we analysed the neuronal expression of the Engrailed protein by immunohistochemistry in the embryonic nerve cord of a parthenogenetic crustacean, the Marbled Crayfish (Marmorkrebs). We paid particular attention to the individual identification of Engrailed expressing putative neuroblasts in the crayfish embryos. Engrailed positive cells in the neuroectoderm were counted, measured and mapped from 38 to 65% of embryonic development. That way, several Engrailed positive putative neuroblasts and putative neurons were identified. Our findings are compared with earlier studies on Engrailed expression during germ band formation in Crustacea. Recent data on neurogenesis in an amphipod crustacean have provided compelling evidence for the homology of several identified neuroblasts between this amphipod and insects. The present report may serve as a basis to explore the question if during crustacean neurogenesis additional communalities with insects exist.

Keywords: neurogenesis • neuroblasts • ventral nerve cord • neurophylogeny • evolution • Arthropoda • Tetraconata • Crustacea

Procambarus clarkii clones?

A paper making a quite surprising claim snuck out back in August. Yue and colleagues, collecting Procambarus clarkii in China, claim to have found genetically identical individuals. They found 15 individuals that are genetically identical to at least one other individual in their sample of 120. This provides evidence of cloning in this very commonly used lab species. This is highly surprising if true, since there have been no shortage of labs working on P. clarkii over the years.

Doubtless more to come on this story!

Reference

Procambarus clarkiiYue GH, Wang GL, Zhu BQ, Wang CM, Zhu ZY, Lo LC. 2008. Discovery of four natural clones in a crayfish species Procambarus clarkii. International Journal of Biological Sciences 4(5):279-282. http://www.biolsci.org/v04p0279.htm

Great moments in crayfish research: Stochastic resonance

In one of those end-of-the-year "Top 10" lists that are so popular, New Scientist compiled a list of its top 10 brain articles. As I scanned through the list, I spotted one that I knew had a crayfish connection: "Does the brain feature built-in noise?"

When you type "crayfish" into Google Scholar, the first two hits, with over 600 citations each, both relate to noise, and they concern one experiment. The first contains a review of the second, so the second paper, by Douglass and collegues (1993), is the primary article.

The paper is about stochastic resonance in crayfish.

Yup. That one's going to take some explaining.

Imagine you're on the ground, trying to pick apples off an apple tree on a completely calm, windless day. You can only reach (or jump!) so far, and the apples on the branch remain just out of reach.

Now imagine the same scenario, but instead with a little gust wind blowing. Now the branches, instead of staying still, start to sway in the breeze. And just once in a while, that extra push from the breeze puts an apple close enough that you can grab it. That random movement of gusty wind actually helped accomplish something. That's much like stochastic resonance.

Of course, there will be limits to this. If the wind gets too severe, the branches of the apple tree will be flailing around so much that grabbing an apple will get harder and harder, not easier.

The New Scientist article put it like this:

Noise is usually a nuisance, as anyone who lives under a flight path or has tried to listen to a distant AM radio station can testify. But to engineers it can be a godsend, and now its benefits are cropping up in biology, too. More than a decade of research suggests that under some circumstances, a small injection of noise can sharpen up the way in which an organism senses its environment. For example, crayfish are better at detecting the subtle fin movements of predatory fish when the water is turbulent rather than still.

Resonance graphThe experimenters recorded from sensory hairs (sometimes called tactile afferents) on the tailfan of crayfish. These small hairs are very sensitive to water movement, and feed into various systems, including the escape response system. In the escape system (and no doubt neurons), no one sensory cell has a big enough signal to reach the threshold for the next cell in the chain to fire. Thus, a little random noise in the environment actually makes the sensory hairs more likely to fire the target neurons, because the noise pushes the system a little closer to threshold overall. And the authors performed experiments showing that this actually occurs with real neurons in real animals. That's what the graph shows: the best signal (Y axis) is here there's a little noise, not at the lowest noise level (X axis).

It's not at all intuitive, yet it's probably very common in biological and non-biological systems. And that combination is arguably why this is one of the most cited crayfish papers in biology.

References

Douglass JK, Wilkens L, Pantazelou E, & Moss F. 1993. Noise enhancement of information transfer in crayfish mechanoreceptors by stochastic resonance. Nature 365(6444): 337-340. http://dx.doi.org/10.1038/365337a0

02 December 2008

Fish and crayfish

Pet storeAlthough this blog is focused on science, I do occasionally get questions about Marmorkrebs as pets, which is great. I am planning on doing a little frequently asked questions list on pet care, but here's a couple of thoughts for those keeping Marmorkrebs as pets.

Marmorkrebs do best at room temperature (20°C). If you have Marmorkrebs in with some tropical fish in a heated tank, the crayfish may not fare as well.

Marmorkrebs are generally not aggressive. Still, most crayfish are not picky eaters, and would probably grab at another fish in the tank if they had the chance. And conversely, some big fish might find crayfish tasty and attack, particularly after molting.

14 November 2008

If you liked something in this blog...

The Open Laboratory 2008 is a competition for science writing in blogs. The current list of nominees is here, and yes, I self-nominated a post from this year from this blog. If there was a post this year you liked, you might consider mentioning it by this form.

Glorious movies of zebrafish development

This week, Science published an article about zebrafish development. The article, however, does not do justice to the joyous, glorious movies that it is about. Single frames don't do -- you really have to see these things in motion.

Check it out here. I think many people will find them fascinating, even non-biologists. The early stages show near-simultaneous cell divisions making the embryo pulse, while the later stages show cells rolling around the embryo like fireworks obeying some strange alternate laws of gravity.

Since zebrafish represent the kind of work that Marmorkrebs are very good for -- development -- the natural question to ask is, can similar approaches be applied to Marmorkrebs eggs? Hard to say. Zebrafish embryos are quite transparent, whereas Marmorkrebs embryos are more yolky and therefore opaque. But many things are possible, and this technology might be able to visualize at least parts of what's going on.

The follow-up question might be, "Can I play with those great toys?" The "toys" in this case is their modified confocal microscope that made this possible. Alas, not possible for me, since the team hails from Germany.

Zebrafish frame grab 2